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  5. Azfi_s0111.g045667

Azfi_s0111.g045667 (RIN4)


Aliases : RIN4

Description : not classified & original description: CDS=218-763


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0111.g045667
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G25070 RIN4 RPM1 interacting protein 4 0.03 OrthoFinder output from all 47 species
AT3G48450 No alias RPM1-interacting protein 4 (RIN4) family protein 0.03 OrthoFinder output from all 47 species
Aev_g07142 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28507 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Als_g35611 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aob_g11220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51468.t1 RIN4, Aspi01Gene51468 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60879.t1 RIN4, Aspi01Gene60879 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G072000.1 Ceric.18G072000 not classified & original description: pacid=50621871... 0.03 OrthoFinder output from all 47 species
Ceric.22G062300.1 Ceric.22G062300 not classified & original description: pacid=50614018... 0.04 OrthoFinder output from all 47 species
Dac_g10666 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Dcu_g04716 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Ehy_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004747001 RIN4 External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01020994001 RIN4 External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49340.1 LOC_Os02g49340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g17870.1 LOC_Os06g17870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g30938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g26110.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018170 RIN4 not classified & original description: CDS=1115-1720 0.03 OrthoFinder output from all 47 species
Sam_g16131 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sam_g33967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g40068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083390.4.1 RIN4, Solyc06g083390 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Solyc09g059430.3.1 RIN4, Solyc09g059430 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Spa_g14777 NOI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 106 136
No external refs found!