1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g04016

Ehy_g04016


Description : tRNA cytidine acetyltransferase & original description: none


Gene families : OG0005981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005981_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04016
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT3G57940 No alias Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0.04 OrthoFinder output from all 47 species
Adi_g019634 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05493 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065787 No alias tRNA cytidine acetyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g02104 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cre03.g192850 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Dcu_g10728 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03478 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022250001 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os12g07300.1 LOC_Os12g07300 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.05 OrthoFinder output from all 47 species
Len_g50923 No alias tRNA cytidine acetyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435179g0010 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.02 OrthoFinder output from all 47 species
Mp2g04980.1 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.03 OrthoFinder output from all 47 species
Msp_g19363 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03973 No alias tRNA cytidine acetyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008523 No alias tRNA cytidine acetyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Smo140315 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g051670.3.1 Solyc04g051670 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.03 OrthoFinder output from all 47 species
Zm00001e026623_P001 Zm00001e026623 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0030684 preribosome IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000182 GNAT_dom 518 746
IPR013562 TmcA_N 8 200
IPR027992 tRNA_bind_dom 761 979
IPR007807 Helicase_dom 281 477
No external refs found!