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  5. Azfi_s0104.g044851

Azfi_s0104.g044851


Description : component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT) activation complex & original description: CDS=127-1830


Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0104.g044851

Target Alias Description ECC score Gene Family Method Actions
AT5G38600 No alias Proline-rich spliceosome-associated (PSP) family protein... 0.03 OrthoFinder output from all 47 species
Als_g31352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19417 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Len_g20965 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Mp4g19730.1 No alias component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 315 355
No external refs found!