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  5. Azfi_s0102.g044616

Azfi_s0102.g044616


Description : histone demethylase *(KDM5) & original description: CDS=47-4564


Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0102.g044616

Target Alias Description ECC score Gene Family Method Actions
Ehy_g24352 PKDM7D histone demethylase *(PKDM7) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g10770.1 PKDM7D, LOC_Os05g10770 histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 234 286
IPR003347 JmjC_dom 49 140
IPR013637 Lys_sp_deMease-like_dom 403 556
IPR013637 Lys_sp_deMease-like_dom 561 801
IPR013637 Lys_sp_deMease-like_dom 760 1026
IPR019787 Znf_PHD-finger 1336 1396
No external refs found!