Solyc08g078320.3.1 (Solyc08g078320.3)


Aliases : Solyc08g078320.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress. HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1)


Gene families : OG_01_0004630 (Gene family) Phylogenetic Tree(s): OG0004630_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g078320.3.1
Cluster HCCA cluster: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AT2G39810 HOS1 ubiquitin-protein ligases 0.06 Gene family
Cre16.g683437 No alias No description available 0.07 Gene family
GSVIVT01005813001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A... 0.07 Gene family
LOC_Os03g52700 Os03g0737200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A... 0.06 Gene family
MA_10431906g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A... 0.04 Gene family
MA_573521g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A... 0.04 Gene family
Zm00001d013318 GRMZM2G312738 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING A... 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025151 ELYS_dom 330 605
No external refs found!