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  5. AMTR_s00145p00079180

AMTR_s00145p00079180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00145.28

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL1 component


Gene families : OG_01_0003592 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003592_tree ,
OG_02_0003587 (LandPlants) Phylogenetic Tree(s): OG_02_0003587_tree ,
OG_03_0012171 (SeedPlants) Phylogenetic Tree(s): OG_03_0012171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00145p00079180
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT2G39470 PPL2 PsbP-like protein 2 0.03 Archaeplastida
AT3G55330 PPL1 PsbP-like protein 1 0.04 Archaeplastida
Cre12.g509050 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01016616001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 Archaeplastida
GSVIVT01016618001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 Archaeplastida
Gb_31653 No alias PPL1 protein involved in PS-II assembly 0.03 Archaeplastida
LOC_Os03g17174.1 No alias component PnsL1 of NDH lumen subcomplex L 0.02 Archaeplastida
LOC_Os08g25900.1 No alias PPL1 protein involved in PS-II assembly 0.07 Archaeplastida
MA_418221g0010 No alias PsbP-like protein 1, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Mp2g21180.1 No alias PPL1 protein involved in PS-II assembly 0.04 Archaeplastida
Pp3c2_13270V3.1 No alias PsbP-like protein 1 0.06 Archaeplastida
Solyc03g114930.3.1 No alias PPL1 protein involved in PS-II assembly 0.07 Archaeplastida
Solyc10g054420.2.1 No alias component PnsL1 of NDH lumen subcomplex L 0.05 Archaeplastida
Zm00001e000164_P005 No alias Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
AT2G39470 PPL2 PsbP-like protein 2 0.03 LandPlants
AT3G55330 PPL1 PsbP-like protein 1 0.04 LandPlants
GSVIVT01016616001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.07 LandPlants
GSVIVT01016618001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 LandPlants
Gb_31653 No alias PPL1 protein involved in PS-II assembly 0.02 LandPlants
LOC_Os03g17174.1 No alias component PnsL1 of NDH lumen subcomplex L 0.02 LandPlants
LOC_Os08g25900.1 No alias PPL1 protein involved in PS-II assembly 0.06 LandPlants
MA_418221g0010 No alias PsbP-like protein 1, chloroplastic OS=Arabidopsis... 0.05 LandPlants
Mp2g21180.1 No alias PPL1 protein involved in PS-II assembly 0.03 LandPlants
Pp3c2_13270V3.1 No alias PsbP-like protein 1 0.04 LandPlants
Solyc03g114930.3.1 No alias PPL1 protein involved in PS-II assembly 0.07 LandPlants
Solyc10g054420.2.1 No alias component PnsL1 of NDH lumen subcomplex L 0.06 LandPlants
Zm00001e000164_P005 No alias Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp.... 0.02 LandPlants
AT2G39470 PPL2 PsbP-like protein 2 0.04 SeedPlants
GSVIVT01016616001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 SeedPlants
LOC_Os03g17174.1 No alias component PnsL1 of NDH lumen subcomplex L 0.02 SeedPlants
Solyc10g054420.2.1 No alias component PnsL1 of NDH lumen subcomplex L 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002683 PsbP_C 66 234
No external refs found!