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  5. Azfi_s0102.g044477

Azfi_s0102.g044477


Description : core component *(RBX1) of CULLIN-based E3 ubiquitin ligase complexes & original description: CDS=177-539


Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0102.g044477
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cre12.g543450 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
LOC_Os02g47870.1 LOC_Os02g47870 RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.03 OrthoFinder output from all 47 species
Solyc12g009120.2.1 HRT1, ATRBX1,... RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.02 OrthoFinder output from all 47 species
Tin_g07904 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquiTin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 52 110
No external refs found!