1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0100.g044340

Azfi_s0100.g044340


Description : component *(PRL1/MAC2) of MAC spliceosome-associated complex & original description: CDS=252-1709


Gene families : OG0005707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0100.g044340

Target Alias Description ECC score Gene Family Method Actions
Cre10.g446900 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Pnu_g08846 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006776 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Solyc01g094480.4.1 PRL1, Solyc01g094480 component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
Spa_g05137 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 207 245
IPR001680 WD40_repeat 296 329
IPR001680 WD40_repeat 166 203
IPR001680 WD40_repeat 433 462
IPR001680 WD40_repeat 250 287
No external refs found!