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  5. Azfi_s0098.g043953

Azfi_s0098.g043953 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : subfamily ABCG transporter & original description: CDS=1-3627


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0098.g043953
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00191700 PDR11, ATPDR11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 OrthoFinder output from all 47 species
Aev_g14775 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37548 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02114.t4 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28059.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43685.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72848.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72851.t2 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72947 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G065500.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09408 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_249533g0010 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pnu_g20429 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c19_17390V3.1 PDR1, ATPDR1,... pleiotropic drug resistance 1 0.03 OrthoFinder output from all 47 species
Ppi_g33371 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g40989 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59241 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009392 ABCG40, PDR12,... subfamily ABCG transporter & original description: CDS=1-4470 0.03 OrthoFinder output from all 47 species
Sam_g50120 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067000.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g24438 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g12263 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 743 806
IPR029481 ABC_trans_N 87 165
IPR003439 ABC_transporter-like_ATP-bd 901 1053
IPR003439 ABC_transporter-like_ATP-bd 192 373
IPR013525 ABC_2_trans 528 736
IPR043926 ABCG_dom 406 458
IPR043926 ABCG_dom 1082 1143
No external refs found!