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  5. Azfi_s0098.g043926

Azfi_s0098.g043926 (FLN1)


Aliases : FLN1

Description : cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) & original description: CDS=198-1616


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0098.g043926
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Azfi_s2046.g108873 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.16 OrthoFinder output from all 47 species
Gb_38659 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species
Len_g15047 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Solyc09g011850.4.1 FLN1, Solyc09g011850 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Zm00001e019266_P002 FLN1, Zm00001e019266 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 91 427
No external refs found!