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  5. Azfi_s0096.g043763

Azfi_s0096.g043763 (PAB2, PABP2, ATPAB2)


Aliases : PAB2, PABP2, ATPAB2

Description : mRNA poly-A-tail binding factor *(PABP) & original description: CDS=29-1951


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0096.g043763

Target Alias Description ECC score Gene Family Method Actions
Adi_g011274 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g112648 PAB2, PABP2, ATPAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12737 PAB8, PABP8 mRNA poly-A-tail binding factor *(PABP) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g14035 PAB8, PABP8 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002004 PABP_HYD 555 619
IPR000504 RRM_dom 190 258
IPR000504 RRM_dom 293 360
IPR000504 RRM_dom 12 82
IPR000504 RRM_dom 100 167
No external refs found!