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  5. Azfi_s0094.g043495

Azfi_s0094.g043495


Description : not classified & original description: CDS=1-2592


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0094.g043495

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g004448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g11506 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31151 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35756 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene25448.t1 Aspi01Gene25448 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29787.t2 Aspi01Gene29787 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g30166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21053 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g61335 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009076 No alias not classified & original description: CDS=1-1737 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019605 MEF19 not classified & original description: CDS=1-1827 0.08 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 833 853
IPR002885 Pentatricopeptide_repeat 259 282
IPR002885 Pentatricopeptide_repeat 387 433
IPR002885 Pentatricopeptide_repeat 488 535
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 591 638
IPR002885 Pentatricopeptide_repeat 693 739
IPR002885 Pentatricopeptide_repeat 81 127
No external refs found!