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  5. Ehy_g03909

Ehy_g03909


Description : not classified & original description: none


Gene families : OG0002848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g03909

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00230890 evm_27.TU.AmTr_v1... PHD finger protein EHD3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Aob_g05322 ATMBD9, MBD9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G072700.1 Ceric.22G072700 not classified & original description: pacid=50613963... 0.04 OrthoFinder output from all 47 species
Dcu_g10503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13284 No alias component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
MA_10431108g0010 No alias PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Ore_g26659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36839 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g42294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029133_P002 Zm00001e029133 PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 93 139
IPR019787 Znf_PHD-finger 433 481
IPR019787 Znf_PHD-finger 602 647
No external refs found!