Solyc08g077500.3.1 (Solyc08g077500.3)


Aliases : Solyc08g077500.3

Description : No description available


Gene families : OG_01_0000807 (Gene family) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g077500.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.06 Gene family
AT4G17140 No alias pleckstrin homology (PH) domain-containing protein 0.03 Gene family
Cre17.g728250 No alias No description available 0.01 Gene family
Cre17.g730650 No alias No description available 0.02 Gene family
GSVIVT01013268001 No alias No description available 0.04 Gene family
GSVIVT01013270001 No alias No description available 0.04 Gene family
GSVIVT01017643001 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family
LOC_Os02g27130 Os02g0470600 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family
MA_10343795g0010 No alias No description available 0.03 Gene family
MA_10426328g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family
MA_10428265g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.03 Gene family
MA_10432463g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.03 Gene family
MA_119498g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
MA_58863g0010 No alias No description available 0.03 Gene family
Smo440026 PACid_15401844 35.1.19 not assigned.no ontology.C2 domain-containing... 0.04 Gene family
Smo444980 PACid_15420567 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family
Zm00001d053262 GRMZM2G057402 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001849 PH_domain 623 730
IPR009543 SHR-BD 3132 3300
IPR031646 VPS13_N2 2 195
IPR009291 Vps62 2033 2174
IPR009291 Vps62 1810 1946
IPR009291 Vps62 3991 4110
IPR031642 VPS13_mid_rpt 382 601
No external refs found!