Azfi_s0090.g042650


Description : not classified & original description: CDS=1-1848


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0090.g042650

Target Alias Description ECC score Gene Family Method Actions
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene02319.t1 Aspi01Gene02319 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.05 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.03 OrthoFinder output from all 47 species
Dcu_g16522 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38638 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01033654001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005639 No alias CDP-diacylglycerol phosphatidylserine synthase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019430 No alias not classified & original description: CDS=1-4416 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 129 158
IPR002885 Pentatricopeptide_repeat 199 220
IPR002885 Pentatricopeptide_repeat 100 126
IPR002885 Pentatricopeptide_repeat 401 427
IPR002885 Pentatricopeptide_repeat 429 459
IPR002885 Pentatricopeptide_repeat 501 525
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 225 267
IPR046848 E_motif 546 599
No external refs found!