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  5. Azfi_s0087.g042419

Azfi_s0087.g042419


Description : AP-endonuclease *(APE2) & original description: CDS=1-2001


Gene families : OG0002359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0087.g042419

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00170140 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
Aev_g20679 No alias AP-endonuclease *(APE2) & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g534151 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36530.1 LOC_Os09g36530 AP-endonuclease (APE2) 0.02 OrthoFinder output from all 47 species
Smo405812 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
Smo81439 No alias DNA damage response.DNA repair mechanisms.base excision... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010666 Znf_GRF 612 662
IPR005135 Endo/exonuclease/phosphatase 43 307
No external refs found!