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Aliases : LHCB5
Description : component *(LHCb5) of LHC-II complex & original description: CDS=1-789
Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00088p00153020 | LHCB2.3, LHCB2,... | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00099p00139960 | LHCB5,... | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G29930 | LHCB1.3, CAB140,... | chlorophyll A/B binding protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G10340 | LHCB5 | light harvesting complex of photosystem II 5 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g022370 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g099029 | LHCB3*1, LHCB3 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06102 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g28157 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12114 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16137 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g16485 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g21318 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g28499 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene35945.t1 | LHCB5, Aspi01Gene35945 | component *(LHCb5) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g08707 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g70411 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.04G028300.1 | LHCB5, Ceric.04G028300 | component *(LHCb5) of LHC-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.05G101100.1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.10G083000.1 | CAB3, AB180,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G001900.1 | LHCB3*1, LHCB3,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.17G067600.1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.32G021700.1 | LHCB1.3, CAB140,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.32G021800.1 | LHCB1.3, CAB140,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G024700.1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cre03.g156900 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g283950 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g284250 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g285250 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g548400 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g673650 | LHCB5 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g00552 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21074 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g23315 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29163 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29165 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g22845 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18807 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g18848 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g29238 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26492 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g29296 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01014439001 | LHCB3*1, LHCB3 | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01021405001 | LHCB1.5, LHB1B2 | Chlorophyll a-b binding protein 21, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028204001 | LHCB1.5, LHB1B2 | Chlorophyll a-b binding protein 16, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030053001 | LHCB2.3, LHCB2, LHCB2.4 | Chlorophyll a-b binding protein 151, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g41710.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g39610.1 | LHCB2.2, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g37550.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g17740.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g13890.1 | LHCB5, LOC_Os11g13890 | component LHCb5 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species | |
| Len_g09838 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17713 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Len_g23888 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g56584 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431300g0020 | LHCB2.2, LHCB2 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| MA_131587g0010 | LHCB1.4, LHB1B1 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| MA_176279g0010 | LHCB5 | component LHCb5 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species | |
| MA_97315g0010 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g29620.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g10900.1 | LHCB5 | component LHCb5 of LHC-II complex | 0.08 | OrthoFinder output from all 47 species | |
| Mp7g05880.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g05890.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g06710.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06760.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g06770.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g06780.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g06790.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g08940.1 | LHCB3*1, LHCB3 | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Mp7g09180.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g05193 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07999 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g08155 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g11796 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g29799 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g29800 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g30962 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43197 | LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g48203 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05167 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15665 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g12400 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19912 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g52168 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g07592 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g19122 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g25964 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c6_6830V3.1 | LHCB2.2, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g30637 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g39667 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g54860 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003924 | LHCB5 | component *(LHCb5) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g005770.3.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g063370.3.1 | LHCB5, Solyc06g063370 | component LHCb5 of LHC-II complex | 0.08 | OrthoFinder output from all 47 species | |
| Solyc07g047850.3.1 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g063600.3.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g006140.2.1 | LHCB2.2, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g011450.2.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g12577 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22371 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29043 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g56296 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g56297 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08938 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004940_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004941_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011045_P002 | LHCB5, Zm00001e011045 | component LHCb5 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e020625_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein 48, chloroplastic OS=Zea... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021290_P001 | LHCB5, Zm00001e021290 | component LHCb5 of LHC-II complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e032450_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein, chloroplastic OS=Zea... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035249_P001 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 70 | 225 |
| No external refs found! |