Solyc08g076830.1.1 (Solyc08g076830.1)


Aliases : Solyc08g076830.1

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g076830.1.1
Cluster HCCA cluster: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G49210 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G49230 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G17905 ATL4H RING/U-box superfamily protein 0.06 Gene family
AT4G40070 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.03 Gene family
Cpa|evm.model.tig00020943.22 No alias No description available 0.02 Gene family
GSVIVT01007975001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os05g36310 Os05g0439000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os05g39260 Os05g0468900 No description available 0.04 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.04 Gene family
MA_10436028g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_124750g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo112690 PACid_15415024 No description available 0.03 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.05 Gene family
Solyc12g087840.1.1 Solyc12g087840.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g087860.2.1 Solyc12g087860.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.02 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d015475 GRMZM2G420012 No description available 0.03 Gene family
Zm00001d018823 GRMZM2G029623 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.02 Gene family
Zm00001d029996 GRMZM2G042538 No description available 0.02 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d037943 GRMZM2G340444 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d040638 No alias No description available 0.03 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.02 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 143 186
No external refs found!