1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0084.g039058

Azfi_s0084.g039058


Description : EC_4.2 carbon-oxygen lyase & original description: CDS=1-1698


Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0084.g039058

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
AT4G13210 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G55720 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g38995 RHS14 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20815 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033628 RHS14 EC_4.2 carbon-oxygen lyase & original description: CDS=168-1388 0.04 OrthoFinder output from all 47 species
Ceric.30G051200.1 RHS14, Ceric.30G051200 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_19802 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
LOC_Os10g31910.1 LOC_Os10g31910 pectate lyase 0.04 OrthoFinder output from all 47 species
MA_203992g0010 No alias pectate lyase 0.03 OrthoFinder output from all 47 species
Pp3c17_16370V3.1 Pp3c17_16370 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003136 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=1-1299 0.05 OrthoFinder output from all 47 species
Sam_g11165 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g071840.3.1 Solyc06g071840 Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g008380.3.1 Solyc09g008380 pectate lyase 0.04 OrthoFinder output from all 47 species
Spa_g31391 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07683 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09317 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004654_P002 Zm00001e004654 pectate lyase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 218 394
No external refs found!