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  5. Azfi_s0076.g037796

Azfi_s0076.g037796 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : not classified & original description: CDS=102-560


Gene families : OG0003855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0076.g037796
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Als_g15292 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G032400.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g08622 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023022 ATUBC1, UBC1 not classified & original description: CDS=193-651 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 41 178
No external refs found!