1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0074.g037455

Azfi_s0074.g037455 (PNH, AGO10, ZLL)


Aliases : PNH, AGO10, ZLL

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: CDS=1-3042


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0074.g037455
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene71412.t1 AGO9, Aspi01Gene71412 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22733 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os07g28850.1 AGO1, LOC_Os07g28850 Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Solyc01g096750.1.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species
Spa_g05727 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e011432_P001 AGO5, Zm00001e011432 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032472 ArgoL2 488 534
IPR014811 ArgoL1 298 347
IPR003165 Piwi 637 962
IPR032473 Argonaute_Mid_dom 545 623
IPR003100 PAZ_dom 372 478
IPR032474 Argonaute_N 155 288
No external refs found!