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  5. Azfi_s0073.g037272

Azfi_s0073.g037272


Description : not classified & original description: CDS=107-1516


Gene families : OG0001703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0073.g037272

Target Alias Description ECC score Gene Family Method Actions
AT1G16280 AtRH36, SWA3, RH36 RNA helicase 36 0.03 OrthoFinder output from all 47 species
Cre12.g505200 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Dac_g00819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04191 AtRH36, SWA3, RH36 SSU processome assembly factor *(SWA3) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os03g46610.1 LOC_Os03g46610 DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43980.1 AtRH36, SWA3,... SSU processome assembly factor (SWA3) 0.03 OrthoFinder output from all 47 species
Mp1g19410.1 AtRH36, SWA3, RH36 SSU processome assembly factor (SWA3) 0.02 OrthoFinder output from all 47 species
Mp4g20180.1 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g12093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40669 No alias SSU processome assembly factor *(SWA3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013281_P004 Zm00001e013281 DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e035639_P002 AtRH36, SWA3,... SSU processome assembly factor (SWA3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP HCCA
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006481 C-terminal protein methylation IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
BP GO:0018410 C-terminal protein amino acid modification IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 57 246
IPR001650 Helicase_C 273 378
No external refs found!