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  5. Azfi_s0073.g037183

Azfi_s0073.g037183


Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: CDS=6-1454


Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0073.g037183

Target Alias Description ECC score Gene Family Method Actions
Als_g08054 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dcu_g16396 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g05122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30939 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 17 98
No external refs found!