Aliases : LBD4
Description : AS2/LOB-type transcription factor & original description: CDS=1-600
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0072.g037067 | |
Cluster | HCCA: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00187850 | LBD2,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00058p00148530 | LBD11,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00080p00153120 | LBD1,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.03 | OrthoFinder output from all 47 species | |
AT1G31320 | LBD4 | LOB domain-containing protein 4 | 0.03 | OrthoFinder output from all 47 species | |
AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.03 | OrthoFinder output from all 47 species | |
AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.04 | OrthoFinder output from all 47 species | |
AT2G31310 | LBD14 | LOB domain-containing protein 14 | 0.04 | OrthoFinder output from all 47 species | |
AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.03 | OrthoFinder output from all 47 species | |
AT3G03760 | LBD20 | LOB domain-containing protein 20 | 0.03 | OrthoFinder output from all 47 species | |
AT3G27650 | LBD25 | LOB domain-containing protein 25 | 0.04 | OrthoFinder output from all 47 species | |
Ala_g27571 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g00489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g09772 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g56957 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g68836 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene18506.t1 | LBD29, ASL16,... | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene41937.t1 | AS2, Aspi01Gene41937 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g02965 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g24489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g33500 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g36506 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.01G082500.1 | LOB, Ceric.01G082500 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G060200.1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.12G084800.1 | LBD25, Ceric.12G084800 | AS2/LOB-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g39794 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g43172 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016330001 | LBD11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029979001 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01032592001 | LBD27, SCP | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032714001 | LBD15, ASL11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032752001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
Gb_14010 | LBD20 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_21467 | LBD22 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_29853 | LBD4 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_39343 | LBD20 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_40767 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g17810.1 | LBD11, LOC_Os03g17810 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g07270.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g27980.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g07510.1 | LBD18, LOC_Os10g07510 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g32426 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_19148g0010 | LBD11 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
MA_962403g0010 | LBD19 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mp4g02620.1 | LBD12, ASL5, PCK1 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mp4g10500.1 | LBD25 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mp5g17820.1 | LBD25 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mp7g00650.1 | ASL1, LBD36 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mp7g14810.1 | LBD25 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Mpzg01450.1 | No alias | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g28887 | LOB | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g44204 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g44922 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g38666 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g40723 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42913 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g43400 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g21903 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g22342 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g25313 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g09676 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0108.g020470 | LOB | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g048740.3.1 | LBD11, Solyc05g048740 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g082310.3.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g082430.2.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16209 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000391_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e001031_P001 | LBD18, Zm00001e001031 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026736_P001 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e038582_P001 | LBD18, Zm00001e038582 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e042347_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042443_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042448_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 17 | 114 |
No external refs found! |