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  5. Azfi_s0072.g037001

Azfi_s0072.g037001


Description : plant-specific stabilizing component *(ClpT) of chloroplast Clp-type protease complex & original description: CDS=57-821


Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0072.g037001
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00213590 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT4G12060 No alias Double Clp-N motif protein 0.05 OrthoFinder output from all 47 species
AT4G25370 No alias Double Clp-N motif protein 0.02 OrthoFinder output from all 47 species
Adi_g100657 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Ceric.02G099200.1 Ceric.02G099200 plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Ehy_g03326 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01018510001 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Gb_11771 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14280.1 LOC_Os03g14280 plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species
Len_g10201 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Mp6g19150.1 No alias plant-specific stabilizing component ClpT of chloroplast... 0.1 OrthoFinder output from all 47 species
Nbi_g08875 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Ore_g15428 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Ppi_g32744 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007541 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Sam_g11082 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Solyc03g007110.3.1 Solyc03g007110 plant-specific stabilizing component ClpT of chloroplast... 0.08 OrthoFinder output from all 47 species
Solyc08g079660.3.1 Solyc08g079660 plant-specific stabilizing component ClpT of chloroplast... 0.07 OrthoFinder output from all 47 species
Tin_g10438 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Zm00001e001033_P002 Zm00001e001033 plant-specific stabilizing component ClpT of chloroplast... 0.06 OrthoFinder output from all 47 species
Zm00001e038581_P001 Zm00001e038581 plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 206 239
IPR004176 Clp_R_dom 89 141
No external refs found!