1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0068.g036443

Azfi_s0068.g036443 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: CDS=1-1389


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0068.g036443

Target Alias Description ECC score Gene Family Method Actions
AT4G02150 IMPA-3, MOS6, ATIMPALPHA3 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g10897 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Cba_g07650 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Cba_g30258 IMPA-1, IMPA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G061800.1 IMPA-4, Ceric.16G061800 nucleocytoplasmic transport cargo adaptor protein... 0.06 OrthoFinder output from all 47 species
Ceric.34G044300.1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021721.27 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Nbi_g02066 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Ppi_g12914 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Sam_g08291 No alias nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Spa_g05287 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Zm00001e025581_P001 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 338 375
IPR000225 Armadillo 294 331
IPR000225 Armadillo 41 81
IPR000225 Armadillo 179 206
IPR000225 Armadillo 210 248
IPR000225 Armadillo 125 166
IPR000225 Armadillo 251 292
IPR000225 Armadillo 84 122
IPR032413 Arm_3 392 436
No external refs found!