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Aliases : ARF6
Description : not classified & original description: CDS=1-678
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00267580 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00034p00110140 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00141830 | HSS, ARF1-BP,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G35240 | ARF20 | auxin response factor 20 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G61830 | ARF18 | auxin response factor 18 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G23980 | ARF9 | auxin response factor 9 | 0.01 | OrthoFinder output from all 47 species | |
| AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g058500 | ARF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098002 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107312 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g110089 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g110090 | ARF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05299 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06732 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06926 | ARF1 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g08567 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11834 | ARF16 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g27076 | ARF4 | transcriptional repressor *(IAA/AUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32730 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49574 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g57848 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g02260 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12632 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12905 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g59651 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene05878.t1 | ARF8, ATARF8,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene05880.t1 | ARF19, IAA22,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11714.t1 | ARF6, Aspi01Gene11714 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene24127.t1 | ARF6, Aspi01Gene24127 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene26636.t1 | ARF16, Aspi01Gene26636 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene27221.t1 | ARF16, Aspi01Gene27221 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene29721.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene33428.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene45721.t1 | ARF6, Aspi01Gene45721 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene46203.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46204.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene66818.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010679 | ARF1 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010950 | ARF11 | not classified & original description: CDS=1-855 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048848 | ARF6 | ARF-type transcription factor & original description: CDS=56-2815 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0384.g067487 | ARF8, ATARF8 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0697.g082598 | ARF16 | ARF-type transcription factor & original description: CDS=1-2376 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07702 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g15068 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19055 | ARF6 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34017 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g37448 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75332 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G034300.1 | ARF16, Ceric.18G034300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G089900.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07132 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g16914 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20944 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23659 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g10952 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11626 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g36299 | ARF6 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g46643 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07024 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08602 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g30682 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011008001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01015035001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.2 | OrthoFinder output from all 47 species | |
| Gb_02925 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_39786 | ARF16 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43910.1 | ARF10, LOC_Os04g43910 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15328 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17368 | ARF6 | ARF-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g24419 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g29145 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g31364 | ARF19, IAA22, ARF11 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05590 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07818 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18657 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29546 | ARF11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10591 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13395 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15857 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06806 | ARF1 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g04470 | ARF1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g19283 | ARF4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g29226 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g42998 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g42774 | ARF16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04439 | ARF10 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g25160 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15721 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16707 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001668 | ARF1 | ARF-type transcription factor & original description: CDS=1-2553 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002378 | ARF1 | ARF-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013444 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12046 | No alias | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo117217 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| Smo437944 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g042260.4.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g082630.3.1 | ARF9, Solyc08g082630 | transcription factor (ARF) | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g12615 | ARF16 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g39677 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g47786 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51847 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g55449 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g56619 | ARF6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10839 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29160 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012670_P001 | ARF16, Zm00001e012670 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013061_P001 | ARF16, Zm00001e013061 | transcription factor (ARF) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e016366_P002 | ARF11, Zm00001e016366 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006304 | DNA modification | IEP | HCCA |
| BP | GO:0006305 | DNA alkylation | IEP | HCCA |
| BP | GO:0006306 | DNA methylation | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |