Azfi_s0065.g035825 (RSH1, ATRSH1, AT-RSH1)


Aliases : RSH1, ATRSH1, AT-RSH1

Description : ppGpp hydrolase *(RSH1) & original description: CDS=212-2167


Gene families : OG0007704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007704_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0065.g035825

Target Alias Description ECC score Gene Family Method Actions
Aev_g45058 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02579 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01958 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13069 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene53667.t2 RSH1, ATRSH1,... ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.58 RSH1, ATRSH1, AT-RSH1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g02008 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028045001 RSH1, ATRSH1, AT-RSH1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os03g22160.1 RSH1, ATRSH1,... Putative GTP diphosphokinase RSH1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Lfl_g03474 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g07090.1 RSH1, ATRSH1, AT-RSH1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g01441 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12213 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19490 No alias ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g098580.3.1 RSH1, ATRSH1,... Putative GTP diphosphokinase RSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 146 262
IPR004095 TGS 325 384
No external refs found!