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  5. Azfi_s0064.g035484

Azfi_s0064.g035484


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: CDS=204-647


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0064.g035484

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00214810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT3G49910 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c14_25170V3.1 Pp3c14_25170 Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_25000V3.1 Pp3c1_25000 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.01 OrthoFinder output from all 47 species
Sam_g12169 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g25824 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc02g064670.1.1 Solyc02g064670 component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc03g044000.1.1 Solyc03g044000 component RPL26 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Spa_g06853 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g54872 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g16183 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!