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  5. Azfi_s0062.g035250

Azfi_s0062.g035250


Description : E3 ubiquitin ligase *(DRR1) & original description: CDS=522-1847


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0062.g035250

Target Alias Description ECC score Gene Family Method Actions
AT4G32600 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g16812 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008139 No alias E3 ubiquitin ligase *(DRR1) & original description: CDS=62-1507 0.04 OrthoFinder output from all 47 species
GSVIVT01035722001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54624.1 LOC_Os02g54624 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Lfl_g05520 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08821 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01168 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14414 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g006940.2.1 Solyc12g006940 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e031174_P001 Zm00001e031174 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 393 434
No external refs found!