Azfi_s0059.g034657 (HSL1, VAL2, HSI2-L1)

Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: CDS=409-3180

Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0059.g034657

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene22980.t2	HSI2, VAL1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Gb_31557	HSL1, VAL2, HSI2-L1	transcription factor (LAV-VAL)	0.03	OrthoFinder output from all 47 species
MA_10432909g0020	HSL1, VAL2, HSI2-L1	transcription factor (LAV-VAL)	0.06	OrthoFinder output from all 47 species
MA_732760g0010	HSL1, VAL2, HSI2-L1	B3 domain-containing transcription repressor VAL2...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011124	Znf_CW	543	586
IPR003340	B3_DNA-bd	282	381

External Links

No external refs found!