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  5. Azfi_s0055.g033944

Azfi_s0055.g033944


Description : not classified & original description: CDS=18-2474


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0055.g033944
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00088020 evm_27.TU.AmTr_v1... Protein RETICULATA-RELATED 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.05 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21405.t1 Aspi01Gene21405 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34266.t1 Aspi01Gene34266 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre03.g177350 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g08400.1 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g15648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.11 OrthoFinder output from all 47 species
Solyc06g050620.3.1 Solyc06g050620 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g22578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 529 714
IPR007314 Cofac_haem-bd_dom 202 422
No external refs found!