Solyc08g074500.3.1 (Solyc08g074500.3)


Aliases : Solyc08g074500.3

Description : 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ROOT GROWTH DEFECTIVE 3 (RGD3)


Gene families : OG_01_0004747 (Gene family) Phylogenetic Tree(s): OG0004747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g074500.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.12 Gene family
Cre16.g687301 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
GSVIVT01019359001 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.12 Gene family
LOC_Os02g06588 Os02g0161300 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family
MA_10430482g0010 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
MA_79681g0010 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family
Smo186944 PACid_15412286 27.3.44 RNA.regulation of transcription.Chromatin... 0.06 Gene family
Zm00001d039160 GRMZM2G168096 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000330 SNF2_N 1472 1770
IPR022707 DUF3535 782 1240
IPR001650 Helicase_C 1832 1933
No external refs found!