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  5. Azfi_s0054.g033664

Azfi_s0054.g033664 (TLP18.3)


Aliases : TLP18.3

Description : protein involved in PS-II assembly *(Psb32) & original description: CDS=1-699


Gene families : OG0007030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0054.g033664
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126870 TLP18.3,... Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
AT1G54780 TLP18.3 thylakoid lumen 18.3 kDa protein 0.08 OrthoFinder output from all 47 species
Adi_g001945 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.04 OrthoFinder output from all 47 species
Aev_g07030 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Ala_g01414 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Als_g32115 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Aob_g07689 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08442 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.04 OrthoFinder output from all 47 species
Cba_g08697 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G027600.1 TLP18.3, Ceric.05G027600 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Cre03.g182150 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Dac_g09996 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g00821 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Dde_g19044 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Dde_g47338 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06594 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01000004001 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
LOC_Os05g33280.1 TLP18.3, LOC_Os05g33280 Psb32 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Len_g16675 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g03752 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.04 OrthoFinder output from all 47 species
MA_10433010g0010 TLP18.3 Psb32 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Mp8g16080.1 TLP18.3 Psb32 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Msp_g03092 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g17006 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.04 OrthoFinder output from all 47 species
Pir_g00411 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.07 OrthoFinder output from all 47 species
Pnu_g12645 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Pp3c11_19220V3.1 TLP18.3, Pp3c11_19220 thylakoid lumen 18.3 kDa protein 0.01 OrthoFinder output from all 47 species
Ppi_g17567 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007460 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
Sam_g08275 No alias protein involved in PS-II assembly *(Psb32) & original... 0.03 OrthoFinder output from all 47 species
Smo127459 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Solyc01g098640.3.1 TLP18.3, Solyc01g098640 Psb32 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Spa_g05586 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Spa_g05587 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Tin_g07118 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e026820_P001 TLP18.3, Zm00001e026820 Psb32 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007621 TPM_dom 86 171
No external refs found!