Azfi_s0052.g031639

Description : E3 ubiquitin ligase & original description: CDS=1-1089

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0052.g031639

Target	Alias	Description	ECC score	Gene Family Method
Ceric.39G041400.1	Ceric.39G041400	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Gb_12336	No alias	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
LOC_Os11g38800.1	LOC_Os11g38800	RING-v-class E3 ligase	0.04	OrthoFinder output from all 47 species
Ppi_g02753	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010979	No alias	E3 ubiquitin ligase & original description: CDS=450-1109	0.05	OrthoFinder output from all 47 species
Sam_g28055	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g069780.4.1	Solyc06g069780	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species
Zm00001e028572_P001	Zm00001e028572	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	157	202
IPR022143	DUF3675	209	318

External Links

No external refs found!