1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0052.g031579

Azfi_s0052.g031579


Description : not classified & original description: CDS=101-1639


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0052.g031579
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Adi_g011761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g056723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13533.t1 Aspi01Gene13533 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44046.t1 Aspi01Gene44046 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60804.t1 Aspi01Gene60804 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.25 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp2g21990.1 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g12891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026056 No alias not classified & original description: CDS=377-1705 0.03 OrthoFinder output from all 47 species
Spa_g09586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27796 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014568_P002 Zm00001e014568 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 462 502
No external refs found!