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  5. Azfi_s0051.g031339

Azfi_s0051.g031339


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: CDS=573-2063


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0051.g031339
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cba_g73310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G045200.1 Ceric.23G045200 not classified & original description: pacid=50610105... 0.02 OrthoFinder output from all 47 species
Dcu_g48948 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g18808 No alias component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
GSVIVT01034541001 No alias Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
Len_g31661 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Mp1g25310.1 No alias component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Pir_g14755 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003699 No alias component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005118 No alias not classified & original description: CDS=41-1585 0.04 OrthoFinder output from all 47 species
Smo444137 No alias No description available 0.06 OrthoFinder output from all 47 species
Zm00001e010865_P001 Zm00001e010865 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 190 238
No external refs found!