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  5. Azfi_s0051.g031286

Azfi_s0051.g031286


Description : not classified & original description: CDS=1-726


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0051.g031286

Target Alias Description ECC score Gene Family Method Actions
AT5G17600 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
Als_g11051 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene37667.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014251 ATL2, TL2 not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030554 No alias not classified & original description: CDS=1-690 0.06 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.29G080000.1 ATL31, CNI1,... not classified & original description: pacid=50625053... 0.05 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14073 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26838 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01019592001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_08038 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g45580.1 RHA3A, LOC_Os06g45580 RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g30310.1 LOC_Os10g30310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_114175g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_88044g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_9521306g0010 ATL2, TL2 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species
Ore_g09567 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023798 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g17354 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000396_P001 Zm00001e000396 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e007157_P001 Zm00001e007157 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species
Zm00001e034469_P001 XERICO, Zm00001e034469 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 139 183
No external refs found!