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  5. Azfi_s0051.g031225

Azfi_s0051.g031225


Description : component *(TRA1) of SAGA transcription co-activator complex & original description: CDS=1-11955


Gene families : OG0002090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0051.g031225

Target Alias Description ECC score Gene Family Method Actions
Als_g07336 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Aob_g32646 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23771.t2 Aspi01Gene23771 component *(TRA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Aspi01Gene41426.t1 Aspi01Gene41426 component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ceric.07G020000.1 Ceric.07G020000 component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.68 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g03224 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
GSVIVT01018783001 No alias Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
LOC_Os07g45064.1 LOC_Os07g45064 component TRA1 of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Len_g40192 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
MA_10427352g0010 No alias component TRA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Ore_g38151 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Solyc02g083780.3.1 Solyc02g083780 protein kinase (PIKK) 0.02 OrthoFinder output from all 47 species
Solyc02g083900.3.1 Solyc02g083900 component TRA1 of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Spa_g25856 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046807 Tra1_central 2 328
IPR000403 PI3/4_kinase_cat_dom 3055 3301
IPR003152 FATC_dom 3358 3387
IPR046805 Tra1_ring 340 2180
IPR003151 PIK-rel_kinase_FAT 2324 2662
No external refs found!