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  5. Azfi_s0050.g031107

Azfi_s0050.g031107 (NOF1)


Aliases : NOF1

Description : regulatory protein *(NOF1) of rDNA transcription & original description: CDS=81-2441


Gene families : OG0005501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0050.g031107
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G17690 NOF1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.09 OrthoFinder output from all 47 species
Ala_g10991 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Aob_g32853 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.39 No alias RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.02 OrthoFinder output from all 47 species
Cre04.g218300 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.09 OrthoFinder output from all 47 species
Gb_20797 NOF1 rDNA transcriptional regulator (NOF1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g22920.1 NOF1, LOC_Os05g22920 rDNA transcriptional regulator (NOF1) 0.06 OrthoFinder output from all 47 species
Mp7g03720.1 NOF1 rDNA transcriptional regulator (NOF1) 0.03 OrthoFinder output from all 47 species
Ore_g15392 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
Ppi_g01193 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Zm00001e039338_P003 NOF1, Zm00001e039338 rDNA transcriptional regulator (NOF1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0034511 U3 snoRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR010678 UTP25 316 497
IPR010678 UTP25 497 811
No external refs found!