Solyc08g068310.3.1 (Solyc08g068310.3)


Aliases : Solyc08g068310.3

Description : 27.3.99 RNA.regulation of transcription.unclassified Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis. La protein 1 (La1)


Gene families : OG_01_0002652 (Gene family) Phylogenetic Tree(s): OG0002652_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g068310.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT4G32720 AtLa1, La1 La protein 1 0.09 Gene family
GSVIVT01035666001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.06 Gene family
LOC_Os04g42010 Os04g0497600 27.3.99 RNA.regulation of transcription.unclassified... 0.11 Gene family
MA_10259599g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
MA_697179g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family
MA_78251g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family
Smo168828 PACid_15402835 No description available 0.07 Gene family
Zm00001d017175 GRMZM2G014750 27.3.99 RNA.regulation of transcription.unclassified... 0.12 Gene family
Zm00001d025767 GRMZM2G096705 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 122 175
IPR014886 La_RRM 350 445
IPR006630 La_HTH 13 82
No external refs found!