1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0048.g030580

Azfi_s0048.g030580 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: CDS=1-3009


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0048.g030580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00091560 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Pnu_g08227 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 347
IPR002885 Pentatricopeptide_repeat 90 137
IPR002885 Pentatricopeptide_repeat 402 451
IPR002885 Pentatricopeptide_repeat 195 244
IPR001680 WD40_repeat 848 887
IPR001680 WD40_repeat 808 841
IPR001680 WD40_repeat 937 972
IPR002885 Pentatricopeptide_repeat 478 501
IPR002885 Pentatricopeptide_repeat 374 397
IPR002885 Pentatricopeptide_repeat 169 188
IPR002885 Pentatricopeptide_repeat 273 294
IPR024977 Apc4_WD40_dom 723 781
No external refs found!