Solyc08g068230.3.1 (Solyc08g068230.3)


Aliases : Solyc08g068230.3

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007943 (Gene family) Phylogenetic Tree(s): OG0007943_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g068230.3.1
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT5G21222 No alias protein kinase family protein 0.07 Gene family
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
GSVIVT01015378001 No alias 29.4 protein.postranslational modification protein... 0.02 Gene family
GSVIVT01035672001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_38077g0010 No alias 29.4 protein.postranslational modification protein... 0.03 Gene family
Zm00001d020775 GRMZM2G003869 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 345 393
IPR002885 Pentatricopeptide_repeat 240 289
IPR002885 Pentatricopeptide_repeat 415 462
IPR002885 Pentatricopeptide_repeat 313 342
IPR002885 Pentatricopeptide_repeat 202 233
IPR002885 Pentatricopeptide_repeat 122 182
No external refs found!