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  5. Azfi_s0047.g030253

Azfi_s0047.g030253 (CRR22)


Aliases : CRR22

Description : not classified & original description: CDS=1-1500


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0047.g030253

Target Alias Description ECC score Gene Family Method Actions
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g09204 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17432 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18129 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23848 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32884 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g34560 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40066 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g09324 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G048900.1 Ceric.04G048900 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.05 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.07 OrthoFinder output from all 47 species
Dac_g28445 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.06 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g02080 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13293 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40238 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42313 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g04353 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g08620 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g15487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46024 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 125 171
IPR002885 Pentatricopeptide_repeat 201 224
IPR002885 Pentatricopeptide_repeat 405 430
IPR002885 Pentatricopeptide_repeat 25 52
No external refs found!