Azfi_s0045.g030001 (EMB93, SOLDAT10)


Aliases : EMB93, SOLDAT10

Description : mTERF-type transcription factor & original description: CDS=144-1211


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0045.g030001
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Aob_g30338 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04562 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07610 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Pir_g37676 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32867 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g072550.3.1 Solyc04g072550 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 278 354
IPR003690 MTERF 184 258
No external refs found!