Azfi_s0045.g029812 (RGL2)


Aliases : RGL2

Description : GRAS-type transcription factor & original description: CDS=1-2046


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0045.g029812

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00135250 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AT1G66350 RGL1, RGL RGA-like 1 0.04 OrthoFinder output from all 47 species
Aspi01Gene01272.t1 RGA, RGA1,... transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036465 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2091 0.04 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
LOC_Os01g45860.1 RGA2, GAI, LOC_Os01g45860 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49990.1 RGA2, GAI, LOC_Os03g49990 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49930.1 RGA2, GAI, LOC_Os05g49930 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31090 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38765 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g20507 RGA2, GAI transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03910 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29064 SCR, SGR1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g30664 RGL1, RGL GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32516 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g32765 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37064 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc10g086370.1.1 RGA, RGA1, Solyc10g086370 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Solyc10g086380.1.1 RGA2, GAI, Solyc10g086380 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Solyc11g011260.1.1 RGA2, GAI, Solyc11g011260 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g01866 RGA2, GAI GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20961 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005412_P001 RGA, RGA1, Zm00001e005412 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e020330_P001 RGA2, GAI, Zm00001e020330 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 477 679
IPR005202 TF_GRAS 382 474
IPR021914 TF_DELLA_N 203 262
No external refs found!