Solyc08g067620.3.1 (Solyc08g067620.3)


Aliases : Solyc08g067620.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g067620.3.1
Cluster HCCA cluster: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Gene family
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Gene family
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.02 Gene family
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Gene family
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Gene family
Cpa|evm.model.tig00020892.22 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Cre11.g467597 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01017187001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017196001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
GSVIVT01017204001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017676001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01031378001 No alias 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
GSVIVT01034748001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42370 Os01g0609200 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os01g42410 Os01g0609900 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os07g33780 Os07g0522500 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_10432311g0010 No alias No description available 0.02 Gene family
MA_10437002g0020 No alias No description available 0.02 Gene family
Smo412699 PACid_15413246 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo412710 PACid_15413851 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Smo417263 PACid_15402303 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo417266 PACid_15402308 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo417272 PACid_15402323 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441722 PACid_15410157 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo96758 PACid_15410129 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d025012 GRMZM2G319138 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029481 ABC_trans_N 1542 1593
IPR029481 ABC_trans_N 88 145
IPR003439 ABC_transporter-like 1618 1800
IPR003439 ABC_transporter-like 901 1053
IPR013525 ABC_2_trans 2631 2844
IPR013525 ABC_2_trans 1198 1412
IPR013525 ABC_2_trans 1954 2166
IPR013525 ABC_2_trans 506 718
IPR003439 ABC_transporter-like 2333 2485
IPR013581 PDR_assoc 2171 2235
IPR013581 PDR_assoc 723 788
IPR003439 ABC_transporter-like 170 352
No external refs found!