Azfi_s0038.g026227

Description : subfamily ABCG transporter & original description: CDS=1-2205

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0038.g026227

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene43486.t1	Aspi01Gene43486	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os01g61940.1	LOC_Os01g61940	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os05g02890.1	LOC_Os05g02890	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp5g04860.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc05g054890.4.1	Solyc05g054890	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g41222	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e019365_P001	Zm00001e019365	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	447	655
IPR003439	ABC_transporter-like_ATP-bd	121	284

External Links

No external refs found!