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  5. Azfi_s0038.g026173

Azfi_s0038.g026173 (PDF2)


Aliases : PDF2

Description : HD-ZIP IV-type transcription factor & original description: CDS=623-3001


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0038.g026173

Target Alias Description ECC score Gene Family Method Actions
AT1G05230 HDG2 homeodomain GLABROUS 2 0.03 OrthoFinder output from all 47 species
AT4G04890 PDF2 protodermal factor 2 0.02 OrthoFinder output from all 47 species
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
Adi_g110417 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05536 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14063 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18649 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15179 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035524 PDF2 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g06562 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70526 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11376 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13002 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15268 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20177 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013073001 HDG5, HB-7 RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
Gb_05082 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Pnu_g02132 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016693 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g080260.4.1 PDF2, Solyc02g080260 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Solyc03g026070.4.1 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc03g098200.4.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Spa_g07168 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16174 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46298 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54611 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002453_P001 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 328 566
IPR001356 Homeobox_dom 129 184
No external refs found!