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  5. Azfi_s0038.g026139

Azfi_s0038.g026139 (APO1)


Aliases : APO1

Description : organelle RNA splicing factor *(APO) & original description: CDS=5-1297


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0038.g026139

Target Alias Description ECC score Gene Family Method Actions
Als_g04268 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19626 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427354g0010 APO3 APO protein 3, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e006942_P002 APO1, Zm00001e006942 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR023342 APO_dom 295 409
IPR023342 APO_dom 62 254
No external refs found!